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Prof. Chen's
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n W.-Y. Zhang and J. Z. Y. Chen,
"Tennis-ball state of a self-avoiding wormlike polymer confined on a spherical
surface", Europhys. Lett.
94, 43001 (2011). n S.
Q. Cao, G. H. Wei, and J. Z. Y. Chen, "Transformations of an oblate vesicle induced by an adhering spherical
particle", Phys. Rev. E (R), accepted and in press (2011). n W. Y. Zhang, Y. Jiang, J. Z. Y. Chen,
"Onsager model for the structure of rigid rods confined on a spherical
surface", Phys. Rev. Lett., under review. n Y. Jiang, W.-Y. Zhang, and J. Z. Y. Chen,
"Dependence of the disorder-lamellar stability boundary of a melt of
asymmetric wormlike AB diblock copolymers on the
chain rigidity", Phys. Rev. E 84, 041803 (2011). n Y. Chen and J. Z. Y. Chen, "Adsorption and engulfing transitions in nanoparticle infiltration into a polymer brush", J.
Polym. Sci. B: Polym
Phys. (R), accepted and in press (2011). n J. Z. Y. Chen, "Coil-bridge transition and Monte
Carlo simulation of a stretched polymer", Phys. Rev. E 84, 041809
(2011). n Y. Jiang and J. Z. Y. Chen, "Isotropic-nematic interface in a lyotropic
system of wormlike chains with the Onsager interaction", Macromolecules
43, 10668 (2010). n J. Z. Y. Chen, "Model
of a polymer chain adsorbed to a soft membrane surface", Phys. Rev. E
(R) 82, 060801R (2010). n M. Deng, Y. Jiang, H. J. Liang, and J. Z. Y.
Chen, "Adsorption of a wormlike polymer in a potential well near a hard
wall", J. Chem. Phys. 133, 034902 (2010). n M. Deng, Y. Jiang, H. J. Liang, and J. Z. Y.
Chen, "Wormlike polymer brush: a self-consistent field treatment",
Macromolecules 43, 3455 (2010). n J. Z. Y. Chen and S. Mkrtchyan, "Adhesion
between a rigid cylindrical particle and a membrane tube", Phys. Rev. E
81, 04906 (2010). n S. Mkrtchyan, C. Ing,
J. Z. Y. Chen, " Adhesion of cylindrical colloids to the surface of a
membrane", Phys. Rev. E 81, 011904 (2010). n J. Z. Y. Chen, Y. Liu, and H. J. Liang,
"Structure of a tubular membrane confining spherical
particles", Phys. Rev. Lett. 102, 168103
(2009). n L. X. Zhan, J. Z. Y.
Chen, W.-K. Liu, "Comparison of
predicted native structures of Met-enkephalin based
on various accessible-surface-area solvent models", J. Comp. Chem. 30,
1051 (2009). n T. Cui, J. D. Ding, and
J. Z. Y. Chen, "Dynamics of a self-avoiding
polymer chain in slit, tube, and cube confinements", Phys. Rev. E 78,
061802(2008). n J. Z. Y. Chen, D. E. Sullivan, and X. Yuan, “Surface-Induced
Liquid Crystal Transitions of Wormlike Polymers Confined in a Narrow Slit; A
Mean-Field Theory”, Macromolecules 40, 1187 (2007). n J. Z. Y. Chen, “Swollen-to-globular transition of a self-avoiding polymer confined in a soft tube”, Phys. Rev. Lett. 98, 088302 (2007). n
R. Jiang, R.B. Barnett,
J. C. L. Chow, and J. Z. Y. Chen, “The use of spatial dose gradients and
probability density function to evaluate the effect of internal organ motion
for prostate IMRT treatment planning”, Phys. in Med. and Bio. 52, 1469
(2007). n
R. Jiang, R. Barnett,
J. C. L. Chow, and J. Z. Y. Chen; "Evaluation of prostate IMRT treatment
planning incorporating internal organ motion using a dose gradient analysis", RADIOTHERAPY AND ONCOLOGY, 84, S68
(2007). n
R. C. Hidalgo, D. E.
Sullivan, and J. Z. Y. Chen, "Smectic phases
in rod-coil diblock copolymers", J. Phys.
Cond. Matt. 19, 376107 (2007) n
H. Imamura and J. Z. Y.
Chen, “Minimum model for the alpha-helix-to-beta-hairpin transition in
proteins”, Proteins:
Structure, Function and Bioinformatics, 67, 459
(2007). n
L. X. Zhan, J. Z. Y.
Chen, and W.-K. Liu, “Computational study of the Trp-cage
miniprotein based on the ECEPP/3 force field”, Proteins:
Structure, Function and Bioinformatics 66, 436
(2007). n
L. X. Zhan, J. Z. Y.
Chen, and W.-K. Liu, “Conformational study of Met-Enkephalin
based on the ECEPP force fields”, Biophys J. 91,
2399 (2006). n
J. Z. Y. Chen and D. E.
Sullivan, “Free energy of a wormlike polymer chain confined in a slit:
crossover between two scaling regimes”, Macromolecules 39, 7769 (2006). n
T. Cui T, J. D. Ding, and J. Z. Y. Chen, “Mean first-passage times of
looping of polymers with intrachain reactive
monomers: Lattice Monte Carlo simulations”, Macromolecules 39, 5540
(2006) n
A. Sain, J. Z. Y. Chen, and B.-Y. Ha, “Persistency of single-stranded DNA: The interplay
between base sequences and base stacking”, Physica
A 369, 679 (2006). n
H. Imamura and J. Z. Y. Chen, “Dependence of folding dynamics and structural stability
on the location of a hydrophobic pair in beta-hairpins”, Proteins: Structure,
Function and Bioinformatics 63, 555 (2006). n
L. X. Zhan, J. Z. Y. Chen, and W.-K. Liu, “Monte Carlo basin paving: An improved
global optimization method”, Phys. Rev. E 73, 015701 (2006). n
J. Z. Y. Chen, D. E.
Sullivan and X. Yuan, “Model for wormlike polymers confined between hard
walls”, Europhys. Lett.
72, 89 (2005). n J. Z. Y. Chen,
H.-K. Tsao, and Y.J. Sheng,
“Diffusion-controlled first contact of the ends of a polymer:
crossover between two scaling regimes”, Phys.
Rev. E 72, 031804 (2005). n L. X. Zhan, J. Z. Y. Chen, W.-K. Liu and S.K. Lai, “Asynchronous multicanonical basin hopping method and its application
to cobalt nanoclusters”, J. Chem
. Phys. 122, 244707 (2005). n R. C. Hidalgo,
D. E. Sullivan, and J. Z. Y. Chen, “Smectic
ordering of homogeneous semiflexible polymers”,
Phys. Rev. E 71, 041804 (2005). n
H. Imamura and J. Z. Y. Chen, “Conformational
conversion of proteins due to mutation”, Europhys Lett. 67, 491 (2004). n
J. Z. Y. Chen, H.-K. Tsao,
and Y. J. Sheng, “First passage time of cyclization dynamics of a wormlike chain”, Europhys. Lett. 65, 407
(2004). n
A. Sain, B.-Y.
Ha, H.-K. Tsao,
and J. Z. Y. Chen, “Chain persistency in single stranded DNA”, Phys. Rev. E 69, 061913 (2004). n
L. X. Zhan, B. Piwowar, W.-K. Liu, P. J. Hsu, S. K. Lai, and J. Z. Y. Chen,
“Multi-canonical basin hopping: a new optimization method for complex systems”, J. Chem. Phys. 120, 5536 (2004) n
Y.-J. Sheng, H. J. Lin,
J. Z. Y. Chen, and H. K. Tsao, “Static properties
of a stacking chain”, Macromolecules 37, 9631 (2004). n
Y.-J. Sheng, H. J. Lin, J. Z. Y. Chen, and H. K. Tsao, “Loop formation of a flexible polymer with two
random reactive sites”, Macromolecules 37, 9257 (2004). n H.-K. Tsao, J. Z. Y. Chen and Y. J. Sheng,
“Effect of intrachain mismatch of loop-to-coil
transition of an associated chain”, Macromolecules 36, 5863 (2003). n Y.-J. Sheng, H.-J. Lin, J. Z. Y. Chen and H.-K. Tsao, “Effect of the intermediate state on the
loop-to-coil transition of a telechelic chain”, J.
Chem. Phys. 118, 8513 (2003). n A. Lemak, J.R. Lepock,
and J. Z. Y. Chen, “Unfolding proteins
in an external field: can we always observe the
intermediate states?”, Phys. Rev. E 67, 031910
(2003) n J. Z. Y. Chen
and H. Imamura, “Unified model for alpha-helix
and beta-sheet
structures in proteins”, Physica A 321, 181 (2003). n J. Z. Y. Chen,
A. Lemak, J. R. Lepock,
and J. P. Kemp, “Minimal model for prion folding
pathways”, Proteins: Structure, Function and Genetics 51, 283 (2003). n A. Lemak, J. R. Lepock,
and J.Z.Y. Chen, “Molecular dynamics simulations of a protein model in
uniform and elongation flow fields”, Proteins: Structure, Function and
Genetics 51, 224 (2003). n Y.-J. Sheng, J. Z. Y. Chen and H.-K. Tsao,
“Open-to-closed transition of a hard-sphere chain with attractive ends”,
Macromolecules 35, 9624
(2002). n A. V.
Ermoshkin, J. Z. Y. Chen and P.-Y. Lai, “Adsorption
of a random copolymer at a lipid bilayer
membrane”, Phys. Rev. E 66,
051912 (2002). n A. F. Wind,
J. P. Kemp, A. V. Ermoshkin, and
J. Z. Y. Chen, “Structural and folding properties of a lattice prion model”, Phys. Rev. E 66, 031909 (2002). n
J. Z. Y. Chen,
“Unzipping dsDNA with a force: numerical
simulations”, Phys. Rev. E 66, 031912
(2002). n
J. P. Kemp and J.
Z. Y. Chen, “Folding dynamics of the helical structure in proteins”, Europhys. Lett. 59, 721 (2002). n
S. Lam, H. Peemoeller and J. Z. Y. Chen, “NMR
measurement and molecular dynamics simulation of interaction of H2O
with a surface”, J. of Colloid and Interface Sci. 248, 255 (2002) n J. P. Kemp and J. Z.
Y. Chen, “Helical structures in proteins”, Biomacromolecules 2, 389 (2001). n S. W. Dwyer, M. Trott, and Z. Y. Chen, “Localization of random copolymers at a sharp interface: effect of the excluded-volume”, J. Chem. Phys. 113, 10377 (2000). n J. P. Kemp, U. Hansmann,
and Z. Y. Chen, “Universal properties of the coil-helix transition”, J. Europhys. 15, 371 (2000). n Z. Y. Chen, “Localization of random
copolymers at an interface”, J. Chem. Phys. 112, 8665 (2000). Other representative publications:
n J. P. Kemp and Z. Y. Chen “Formation of helical
structures in wormlike polymers”, Phys. Rev. Lett.
81, 3880 (1998). n C. Cai and Z. Y.
Chen, “Intrinsic viscosity of starburst dendrimers”,
Macromolecules 31, 6393 (1998). n Z. Y. Chen and S.-M. Cui, “Monte-Carlo
simulations of star-burst dendrimers”,
Macromolecules, 29, 7963 (1996). n Z. Y. Chen and S.-M. Cui, “Orientational
wetting layer of semiflexible polymers near a hard
wall”, Phys. Rev. E 52, 3876 (1995). n Z. Y. Chen, “Nematic
ordering in semiflexible polymer chains”,
Macromolecules 26, 3419 (1993). n Z. Y. Chen, "Continuous isotropic-nematic transition of partially flexible polymers in two dimensions'', Phys. Rev. Lett. 71, 93-96 (1993). n Z. Y. Chen, J. Noolandi and D. Izzo, "Effect of long-range surface interactions on wetting transitions of polymer mixtures'', Phys. Rev. Lett. 66, 727-730 (1991). n Z. Y. Chen and M. B. Walker, "Universal model for modulated phases in the dielectric A2BX4 family'', Phys. Rev. Lett. 65, 1223-1226 (1990). n Z. Y. Chen , A. Abbaci, S. Tang, and J. V. Sengers, "Global thermodynamic behavior of fluids in the critical region'', Phys. Rev. A 42, 4470-4484 (1990).
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